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Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0034075 (LandPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo76175 | |
| Cluster | HCCA: Cluster_109 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00248070 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33680... | 0.04 | Archaeplastida | |
| AMTR_s00177p00030580 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g12770... | 0.05 | Archaeplastida | |
| AT1G16480 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
| AT1G74600 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | Archaeplastida | |
| AT3G11460 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
| AT3G16610 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | Archaeplastida | |
| Gb_39702 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | Archaeplastida | |
| LOC_Os01g72930.1 | No alias | Pentatricopeptide repeat-containing protein At3g13880... | 0.01 | Archaeplastida | |
| LOC_Os03g60200.1 | No alias | Pentatricopeptide repeat-containing protein At2g41080... | 0.01 | Archaeplastida | |
| LOC_Os06g40860.1 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | Archaeplastida | |
| MA_10430171g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | Archaeplastida | |
| MA_117650g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | Archaeplastida | |
| MA_41676g0020 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | Archaeplastida | |
| MA_70677g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Smo428483 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.08 | Archaeplastida | |
| Smo77426 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | Archaeplastida | |
| Solyc01g081290.4.1 | No alias | protein kinase (PEPRK) | 0.03 | Archaeplastida | |
| Solyc02g014360.3.1 | No alias | RNA editing factor (MEF11) | 0.02 | Archaeplastida | |
| Solyc04g009210.1.1 | No alias | Pentatricopeptide repeat-containing protein At5g08305... | 0.02 | Archaeplastida | |
| Solyc09g009950.4.1 | No alias | RNA editing factor (MEF10) | 0.02 | Archaeplastida | |
| Solyc12g099850.1.1 | No alias | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | Archaeplastida | |
| Zm00001e018597_P001 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032867 | DYW_dom | 987 | 1111 |
| No external refs found! |