Smo83878


Description : Cell wall.hemicellulose.heteromannan.synthesis.mannan synthase activities.CSLD-type mannan synthase


Gene families : OG0001034 (Archaeplastida) Phylogenetic Tree(s): OG0001034_tree ,
OG_05_0000623 (LandPlants) Phylogenetic Tree(s): OG_05_0000623_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo83878
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT1G02730 ATCSLD5, CSLD5, SOS6 cellulose synthase-like D5 0.08 Archaeplastida
AT2G33100 CSLD1, ATCSLD1 cellulose synthase-like D1 0.02 Archaeplastida
AT4G38190 ATCSLD4, CSLD4 cellulose synthase like D4 0.02 Archaeplastida
GSVIVT01028071001 No alias Cellulose synthase-like protein D5 OS=Arabidopsis thaliana 0.12 Archaeplastida
LOC_Os06g22980.1 No alias mannan synthase (CSLD) 0.03 Archaeplastida
LOC_Os08g25710.1 No alias mannan synthase (CSLD) 0.02 Archaeplastida
LOC_Os10g42750.1 No alias mannan synthase (CSLD) 0.02 Archaeplastida
LOC_Os12g36890.1 No alias mannan synthase (CSLD) 0.06 Archaeplastida
MA_60546g0010 No alias mannan synthase (CSLD) 0.04 Archaeplastida
Mp2g05660.1 No alias catalytic component CesA of cellulose synthase complex.... 0.02 Archaeplastida
Mp2g05670.1 No alias catalytic component CesA of cellulose synthase complex.... 0.02 Archaeplastida
Pp3c2_1280V3.1 No alias cellulose synthase-like D3 0.02 Archaeplastida
Pp3c2_1330V3.1 No alias cellulose synthase-like D3 0.03 Archaeplastida
Pp3c6_4064V3.1 No alias cellulose synthase-like D3 0.02 Archaeplastida
Solyc09g075550.3.1 No alias mannan synthase (CSLD) 0.09 Archaeplastida
Solyc10g074620.3.1 No alias mannan synthase (CSLD) 0.02 Archaeplastida
Zm00001e039669_P001 No alias mannan synthase (CSLD) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!