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Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.SWA1 assembly factor
Gene families : OG0005878 (Archaeplastida) Phylogenetic Tree(s): OG0005878_tree ,
OG_05_0006928 (LandPlants) Phylogenetic Tree(s): OG_05_0006928_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo89228 | |
| Cluster | HCCA: Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pp3c8_11620V3.1 | No alias | transducin family protein / WD-40 repeat family protein | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006364 | rRNA processing | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
| MF | GO:0004055 | argininosuccinate synthase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004827 | proline-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004834 | tryptophan synthase activity | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0016255 | attachment of GPI anchor to protein | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| BP | GO:0016485 | protein processing | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0016836 | hydro-lyase activity | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| MF | GO:0030145 | manganese ion binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0051604 | protein maturation | IEP | Neighborhood |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018983 | U3_snoRNA-assocProt_15_C | 358 | 499 |
| No external refs found! |