Solyc00g500299.1.1


Description : NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Coffea arabica (sp|p0cc49|nu2c2_cofar : 284.0)


Gene families : OG0001688 (Archaeplastida) Phylogenetic Tree(s): OG0001688_tree ,
OG_05_0001178 (LandPlants) Phylogenetic Tree(s): OG_05_0001178_tree ,
OG_06_0000636 (SeedPlants) Phylogenetic Tree(s): OG_06_0000636_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc00g500299.1.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g16854.1 No alias component NdhB of NDH membrane subcomplex M 0.02 Archaeplastida
LOC_Os07g25004.1 No alias component NdhB of NDH membrane subcomplex M 0.03 Archaeplastida
LOC_Os08g15248.1 No alias component NdhB of NDH membrane subcomplex M 0.03 Archaeplastida
Solyc01g017260.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic... 0.02 Archaeplastida
Solyc04g039790.3.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.02 Archaeplastida
Solyc05g024440.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.07 Archaeplastida
Solyc09g015260.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.02 Archaeplastida
Solyc11g021110.3.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 B,... 0.03 Archaeplastida
Solyc12g033080.1.1 No alias NAD(P)H-quinone oxidoreductase subunit 2 A,... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005047 signal recognition particle binding IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001750 ND/Mrp_mem 23 181
No external refs found!