AMTR_s00021p00193270 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.154

Description : Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.ACX acyl CoA oxidase

Gene families : OG0001763 (Archaeplastida) Phylogenetic Tree(s): OG0001763_tree ,
OG_05_0005661 (LandPlants) Phylogenetic Tree(s): OG_05_0005661_tree ,
OG_06_0007580 (SeedPlants) Phylogenetic Tree(s): OG_06_0007580_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00021p00193270
Cluster	HCCA: Cluster_250

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT5G65110	ATACX2, ACX2	acyl-CoA oxidase 2	0.03	Archaeplastida
GSVIVT01020650001	No alias	Lipid metabolism.lipid degradation.fatty acid...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003995	acyl-CoA dehydrogenase activity	IEA	Interproscan
MF	GO:0003997	acyl-CoA oxidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005777	peroxisome	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006635	fatty acid beta-oxidation	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEA	Interproscan
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	None	Extended
BP	GO:0019395	fatty acid oxidation	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0030258	lipid modification	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0034440	lipid oxidation	None	Extended
CC	GO:0042579	microbody	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Neighborhood
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0004806	triglyceride lipase activity	IEP	Neighborhood
CC	GO:0005643	nuclear pore	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006887	exocytosis	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
MF	GO:0008565	protein transporter activity	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
CC	GO:0009507	chloroplast	IEP	Neighborhood
CC	GO:0009536	plastid	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0016229	steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Neighborhood
CC	GO:0044428	nuclear part	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
CC	GO:0044451	nucleoplasm part	IEP	Neighborhood
BP	GO:0046417	chorismate metabolic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006091	Acyl-CoA_Oxase/DH_cen-dom	186	242
IPR002655	Acyl-CoA_oxidase_C	537	660

External Links

No external refs found!

AMTR_s00021p00193270 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation