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  5. Solyc01g067560.3.1

Solyc01g067560.3.1


Description : transcription factor (MYB-related)


Gene families : OG0001389 (Archaeplastida) Phylogenetic Tree(s): OG0001389_tree ,
OG_05_0003096 (LandPlants) Phylogenetic Tree(s): OG_05_0003096_tree ,
OG_06_0002926 (SeedPlants) Phylogenetic Tree(s): OG_06_0002926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g067560.3.1
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AT3G05380 ATALY2, ALY2 DIRP ;Myb-like DNA-binding domain 0.05 Archaeplastida
AT3G21430 ATALY3, ALY3 No description available 0.05 Archaeplastida
AT5G27610 ALY1, ATALY1 DIRP ;Myb-like DNA-binding domain 0.05 Archaeplastida
Cre13.g570150 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01017770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.09 Archaeplastida
Gb_37435 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_92248g0010 No alias No annotation 0.03 Archaeplastida
Pp3c11_23240V3.1 No alias DNA binding 0.02 Archaeplastida
Smo420594 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 125 160
IPR033471 DIRP 704 804
No external refs found!