Solyc01g081290.4.1

Description : protein kinase (PEPRK)

Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g081290.4.1
Cluster	HCCA: Cluster_263

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00098p00167700	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At5g50390,...	0.05	Archaeplastida
AT3G02330	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.03	Archaeplastida
Cre08.g358250	No alias	Pentatricopeptide repeat-containing protein At5g02860...	0.02	Archaeplastida
GSVIVT01035491001	No alias	Pentatricopeptide repeat-containing protein At4g33170...	0.03	Archaeplastida
Pp3c17_23250V3.1	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	Archaeplastida
Pp3c2_12230V3.1	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.03	Archaeplastida
Smo134463	No alias	Pentatricopeptide repeat-containing protein At2g22070...	0.03	Archaeplastida
Smo76175	No alias	Pentatricopeptide repeat-containing protein At4g13650...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Neighborhood
MF	GO:0042393	histone binding	IEP	Neighborhood
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Neighborhood
CC	GO:0044451	nucleoplasm part	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	553	599
IPR002885	Pentatricopeptide_repeat	654	700
IPR002885	Pentatricopeptide_repeat	755	800
IPR002885	Pentatricopeptide_repeat	855	900
IPR002885	Pentatricopeptide_repeat	1055	1102
IPR000719	Prot_kinase_dom	112	360
IPR032867	DYW_dom	1229	1353
IPR002885	Pentatricopeptide_repeat	929	955
IPR002885	Pentatricopeptide_repeat	827	854
IPR002885	Pentatricopeptide_repeat	957	987
IPR002885	Pentatricopeptide_repeat	1030	1053

External Links

No external refs found!

Solyc01g081290.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation