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  5. AT1G35330

AT1G35330


Description : RING/U-box superfamily protein


Gene families : OG0014058 (Archaeplastida) Phylogenetic Tree(s): OG0014058_tree ,
OG_05_0012111 (LandPlants) Phylogenetic Tree(s): OG_05_0012111_tree ,
OG_06_0013905 (SeedPlants) Phylogenetic Tree(s): OG_06_0013905_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G35330
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT4G09110 No alias RING/U-box superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003680 AT DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004064 arylesterase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005242 inward rectifier potassium channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005249 voltage-gated potassium channel activity IEP Neighborhood
MF GO:0005261 cation channel activity IEP Neighborhood
MF GO:0005267 potassium channel activity IEP Neighborhood
MF GO:0005545 1-phosphatidylinositol binding IEP Neighborhood
BP GO:0006148 inosine catabolic process IEP Neighborhood
BP GO:0006152 purine nucleoside catabolic process IEP Neighborhood
BP GO:0006154 adenosine catabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007568 aging IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008477 purine nucleosidase activity IEP Neighborhood
MF GO:0008493 tetracycline transmembrane transporter activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008825 cyclopropane-fatty-acyl-phospholipid synthase activity IEP Neighborhood
BP GO:0009164 nucleoside catabolic process IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009624 response to nematode IEP Neighborhood
BP GO:0009736 cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010026 trichome differentiation IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010107 potassium ion import IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010345 suberin biosynthetic process IEP Neighborhood
BP GO:0010359 regulation of anion channel activity IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015665 alcohol transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
BP GO:0016098 monoterpenoid metabolic process IEP Neighborhood
BP GO:0016099 monoterpenoid biosynthetic process IEP Neighborhood
BP GO:0016128 phytosteroid metabolic process IEP Neighborhood
BP GO:0016129 phytosteroid biosynthetic process IEP Neighborhood
BP GO:0016131 brassinosteroid metabolic process IEP Neighborhood
BP GO:0016132 brassinosteroid biosynthetic process IEP Neighborhood
MF GO:0016174 NAD(P)H oxidase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0019932 second-messenger-mediated signaling IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022843 voltage-gated cation channel activity IEP Neighborhood
BP GO:0022898 regulation of transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
MF GO:0030551 cyclic nucleotide binding IEP Neighborhood
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0031111 negative regulation of microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0031113 regulation of microtubule polymerization IEP Neighborhood
BP GO:0031115 negative regulation of microtubule polymerization IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031333 negative regulation of protein complex assembly IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032272 negative regulation of protein polymerization IEP Neighborhood
BP GO:0032409 regulation of transporter activity IEP Neighborhood
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0032886 regulation of microtubule-based process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
MF GO:0034768 (E)-beta-ocimene synthase activity IEP Neighborhood
MF GO:0035252 UDP-xylosyltransferase activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0040034 regulation of development, heterochronic IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042454 ribonucleoside catabolic process IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
MF GO:0042895 antibiotic transmembrane transporter activity IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044070 regulation of anion transport IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0045431 flavonol synthase activity IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
BP GO:0046085 adenosine metabolic process IEP Neighborhood
BP GO:0046102 inosine metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046130 purine ribonucleoside catabolic process IEP Neighborhood
MF GO:0047622 adenosine nucleosidase activity IEP Neighborhood
MF GO:0047724 inosine nucleosidase activity IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048506 regulation of timing of meristematic phase transition IEP Neighborhood
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
MF GO:0050551 myrcene synthase activity IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
MF GO:0050734 hydroxycinnamoyltransferase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051494 negative regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0052325 cell wall pectin biosynthetic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0071695 anatomical structure maturation IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0072523 purine-containing compound catabolic process IEP Neighborhood
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Neighborhood
MF GO:0080031 methyl salicylate esterase activity IEP Neighborhood
MF GO:0080032 methyl jasmonate esterase activity IEP Neighborhood
MF GO:0080045 quercetin 3'-O-glucosyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090333 regulation of stomatal closure IEP Neighborhood
BP GO:0090408 phloem nitrate loading IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0099094 ligand-gated cation channel activity IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
MF GO:1901981 phosphatidylinositol phosphate binding IEP Neighborhood
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903959 regulation of anion transmembrane transport IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 127 170
No external refs found!