Solyc01g097760.3.1


Description : component RPL7a of LSU proteome component


Gene families : OG0002306 (Archaeplastida) Phylogenetic Tree(s): OG0002306_tree ,
OG_05_0002050 (LandPlants) Phylogenetic Tree(s): OG_05_0002050_tree ,
OG_06_0002566 (SeedPlants) Phylogenetic Tree(s): OG_06_0002566_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g097760.3.1
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00140240 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
AT2G47610 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.13 Archaeplastida
AT3G62870 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.14 Archaeplastida
Cpa|evm.model.tig00000128.22 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Cre12.g529651 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
GSVIVT01008585001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
GSVIVT01033050001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
GSVIVT01036540001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Gb_36761 No alias component RPL7a of LSU proteome component 0.08 Archaeplastida
Gb_36922 No alias component RPL7a of LSU proteome component 0.07 Archaeplastida
LOC_Os08g23710.1 No alias component RPL7a of LSU proteome component 0.12 Archaeplastida
LOC_Os09g32976.1 No alias component RPL7a of LSU proteome component 0.1 Archaeplastida
MA_109678g0010 No alias component RPL7a of LSU proteome component 0.11 Archaeplastida
MA_648702g0010 No alias component RPL7a of LSU proteome component 0.03 Archaeplastida
Mp2g23250.1 No alias component RPL7a of LSU proteome component 0.15 Archaeplastida
Mp8g17650.1 No alias component RPL7a of LSU proteome component 0.16 Archaeplastida
Pp3c13_24420V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.07 Archaeplastida
Pp3c13_24450V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.1 Archaeplastida
Pp3c15_290V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.18 Archaeplastida
Pp3c26_330V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.13 Archaeplastida
Pp3c26_360V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.15 Archaeplastida
Pp3c9_380V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.12 Archaeplastida
Smo270545 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Zm00001e003683_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e010129_P001 No alias component RPL7a of LSU proteome component 0.08 Archaeplastida
Zm00001e034633_P002 No alias component RPL7a of LSU proteome component 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0034457 Mpp10 complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044452 nucleolar part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 115 206
No external refs found!