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  5. AMTR_s00022p00099080

AMTR_s00022p00099080 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.83

Description : Protein STICHEL-like 4 OS=Arabidopsis thaliana


Gene families : OG0000633 (Archaeplastida) Phylogenetic Tree(s): OG0000633_tree ,
OG_05_0000427 (LandPlants) Phylogenetic Tree(s): OG_05_0000427_tree ,
OG_06_0011942 (SeedPlants) Phylogenetic Tree(s): OG_06_0011942_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00099080
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g10670.1 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10318746g0010 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_64150g0010 No alias Protein STICHEL-like 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c9_18380V3.1 No alias AAA-type ATPase family protein 0.04 Archaeplastida
Smo2945 No alias Protein STICHEL OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc03g111680.3.1 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e007784_P001 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e019906_P002 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e021817_P001 No alias No annotation 0.05 Archaeplastida
Zm00001e039775_P001 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004357 glutamate-cysteine ligase activity IEP Neighborhood
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019107 myristoyltransferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 507 618
No external refs found!