- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.204
Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM5 tRNA guanosine-methyltransferase
Gene families : OG0002430 (Archaeplastida) Phylogenetic Tree(s): OG0002430_tree ,
OG_05_0002446 (LandPlants) Phylogenetic Tree(s): OG_05_0002446_tree ,
OG_06_0009552 (SeedPlants) Phylogenetic Tree(s): OG_06_0009552_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00022p00188610 | |
| Cluster | HCCA: Cluster_144 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre16.g672041 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.02 | Archaeplastida | |
| Mp3g03830.1 | No alias | tRNA guanosine-methyltransferase (TRM5) | 0.01 | Archaeplastida | |
| Zm00001e022914_P002 | No alias | tRNA guanosine-methyltransferase (TRM5) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016740 | transferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
| CC | GO:0000922 | spindle pole | IEP | Neighborhood |
| MF | GO:0001671 | ATPase activator activity | IEP | Neighborhood |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Neighborhood |
| MF | GO:0004221 | obsolete ubiquitin thiolesterase activity | IEP | Neighborhood |
| MF | GO:0004484 | mRNA guanylyltransferase activity | IEP | Neighborhood |
| MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
| MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
| MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
| MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Neighborhood |
| MF | GO:0004612 | phosphoenolpyruvate carboxykinase (ATP) activity | IEP | Neighborhood |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005815 | microtubule organizing center | IEP | Neighborhood |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006006 | glucose metabolic process | IEP | Neighborhood |
| BP | GO:0006094 | gluconeogenesis | IEP | Neighborhood |
| BP | GO:0006370 | 7-methylguanosine mRNA capping | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006470 | protein dephosphorylation | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| MF | GO:0008047 | enzyme activator activity | IEP | Neighborhood |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008192 | RNA guanylyltransferase activity | IEP | Neighborhood |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016311 | dephosphorylation | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| MF | GO:0016791 | phosphatase activity | IEP | Neighborhood |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
| BP | GO:0019318 | hexose metabolic process | IEP | Neighborhood |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| BP | GO:0036260 | RNA capping | IEP | Neighborhood |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0051087 | chaperone binding | IEP | Neighborhood |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0060590 | ATPase regulator activity | IEP | Neighborhood |
| MF | GO:0070568 | guanylyltransferase activity | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |