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  5. Solyc02g070210.3.1

Solyc02g070210.3.1


Description : Patellin-4 OS=Arabidopsis thaliana (sp|q94c59|patl4_arath : 399.0)


Gene families : OG0000809 (Archaeplastida) Phylogenetic Tree(s): OG0000809_tree ,
OG_05_0000939 (LandPlants) Phylogenetic Tree(s): OG_05_0000939_tree ,
OG_06_0001148 (SeedPlants) Phylogenetic Tree(s): OG_06_0001148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g070210.3.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00086020 evm_27.TU.AmTr_v1... Patellin-6 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G30690 No alias Sec14p-like phosphatidylinositol transfer family protein 0.05 Archaeplastida
GSVIVT01021727001 No alias Patellin-4 OS=Arabidopsis thaliana 0.14 Archaeplastida
LOC_Os05g27820.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os06g45990.2 No alias Patellin-4 OS=Arabidopsis thaliana... 0.18 Archaeplastida
Zm00001e019109_P003 No alias Patellin-5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e031502_P004 No alias Patellin-6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e031729_P005 No alias Patellin-5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e037771_P002 No alias Patellin-4 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 197 355
IPR011074 CRAL/TRIO_N_dom 118 171
No external refs found!