Solyc02g082920.4.1

Description : Acidic 26 kDa endochitinase OS=Solanum lycopersicum (sp|q05539|chia_sollc : 513.0)

Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000335 (LandPlants) Phylogenetic Tree(s): OG_05_0000335_tree ,
OG_06_0000542 (SeedPlants) Phylogenetic Tree(s): OG_06_0000542_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g082920.4.1
Cluster	HCCA: Cluster_171

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243300	evm_27.TU.AmTr_v1...	Endochitinase A2 OS=Pisum sativum	0.07	Archaeplastida
AMTR_s00001p00243570	evm_27.TU.AmTr_v1...	Basic 30 kDa endochitinase OS=Solanum lycopersicum	0.07	Archaeplastida
AMTR_s00001p00243680	evm_27.TU.AmTr_v1...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.07	Archaeplastida
AMTR_s00001p00243780	evm_27.TU.AmTr_v1...	Endochitinase A2 OS=Pisum sativum	0.06	Archaeplastida
AMTR_s00045p00134660	evm_27.TU.AmTr_v1...	Chitinase 10 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
AMTR_s00066p00199730	evm_27.TU.AmTr_v1...	Endochitinase EP3 OS=Arabidopsis thaliana	0.08	Archaeplastida
AT1G05850	HOT2, ELP,...	Chitinase family protein	0.03	Archaeplastida
AT2G43570	CHI	chitinase, putative	0.04	Archaeplastida
AT2G43610	No alias	Chitinase family protein	0.03	Archaeplastida
AT2G43620	No alias	Chitinase family protein	0.03	Archaeplastida
AT3G12500	HCHIB, B-CHI,...	basic chitinase	0.03	Archaeplastida
AT3G16920	CTL2, ATCTL2	chitinase-like protein 2	0.03	Archaeplastida
AT3G47540	No alias	Chitinase family protein	0.04	Archaeplastida
AT3G54420	ATEP3, EP3,...	homolog of carrot EP3-3 chitinase	0.05	Archaeplastida
AT4G01700	No alias	Chitinase family protein	0.04	Archaeplastida
GSVIVT01007190001	No alias	Basic endochitinase OS=Vitis vinifera	0.06	Archaeplastida
GSVIVT01038108001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.09	Archaeplastida
GSVIVT01038111001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01038120001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	Archaeplastida
Gb_03376	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_07463	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Gb_07464	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_07465	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_10203	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.04	Archaeplastida
Gb_20316	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_20764	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Gb_20766	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Gb_20767	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Gb_29991	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_29992	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Gb_29993	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_34557	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os02g39330.1	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os03g04060.1	No alias	Chitinase 11 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os04g41620.1	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
LOC_Os04g41680.1	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.07	Archaeplastida
LOC_Os05g04690.1	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
LOC_Os05g33130.1	No alias	Chitinase 2 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
LOC_Os06g51050.1	No alias	Chitinase 3 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os06g51060.1	No alias	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os10g39680.1	No alias	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_102538g0010	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 100.0)	0.05	Archaeplastida
MA_10262473g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10313114g0010	No alias	Endochitinase B OS=Nicotiana tabacum...	0.07	Archaeplastida
MA_10427514g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
MA_114934g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_170598g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_295712g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_3814373g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_4343642g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_741127g0010	No alias	Endochitinase At2g43610 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_7544918g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_9952704g0010	No alias	Endochitinase OS=Phaseolus vulgaris...	0.04	Archaeplastida
Mp2g24410.1	No alias	Endochitinase CH25 OS=Brassica napus...	0.04	Archaeplastida
Mp4g01780.1	No alias	Endochitinase CH5B OS=Phaseolus vulgaris...	0.02	Archaeplastida
Mp4g20440.1	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 235.0)	0.05	Archaeplastida
Mp5g21830.1	No alias	Endochitinase CH25 OS=Brassica napus...	0.03	Archaeplastida
Pp3c13_18820V3.1	No alias	Chitinase family protein	0.02	Archaeplastida
Pp3c6_130V3.1	No alias	basic chitinase	0.03	Archaeplastida
Smo227948	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.02	Archaeplastida
Smo426710	No alias	Endochitinase A OS=Zea mays	0.03	Archaeplastida
Solyc02g061770.4.1	No alias	Basic endochitinase (Fragment) OS=Solanum lycopersicum...	0.04	Archaeplastida
Solyc02g082960.3.1	No alias	Basic endochitinase (Fragment) OS=Solanum lycopersicum...	0.05	Archaeplastida
Solyc04g072000.4.1	No alias	Endochitinase EP3 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc10g074390.1.1	No alias	Endochitinase A OS=Nicotiana tabacum...	0.05	Archaeplastida
Solyc12g098810.2.1	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.04	Archaeplastida
Zm00001e000271_P001	No alias	Chitinase 11 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Zm00001e002252_P001	No alias	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e015056_P001	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Zm00001e027534_P001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Zm00001e030152_P001	No alias	Basic endochitinase A OS=Secale cereale...	0.03	Archaeplastida
Zm00001e034566_P001	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida
Zm00001e041138_P001	No alias	Endochitinase B (Fragment) OS=Zea mays...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0042737	drug catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	30	244

External Links

No external refs found!

Solyc02g082920.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation