AMTR_s00023p00044590 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.14

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000734 (SeedPlants) Phylogenetic Tree(s): OG_06_0000734_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00023p00044590
Cluster	HCCA: Cluster_68

Target	Alias	Description	ECC score	Gene Family Method
AT1G04370	ERF14, ATERF14	Ethylene-responsive element binding factor 14	0.03	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT1G36060	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G53170	ATERF8, ATERF-8, ERF8	ethylene response factor 8	0.02	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G78080	RAP2.4	related to AP2 4	0.03	Archaeplastida
AT2G20880	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.02	Archaeplastida
AT2G47520	HRE2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.03	Archaeplastida
AT3G25890	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G16750	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.06	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.03	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.02	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G64750	ABR1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.02	Archaeplastida
GSVIVT01005747001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01018270001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01018271001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01028314001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01035098001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036201001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_01210	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01214	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_01217	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_07474	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_07475	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_07476	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_07992	No alias	Ethylene-responsive transcription factor RAP2-9...	0.02	Archaeplastida
Gb_08035	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17207	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_17208	No alias	transcription factor (DREB). C2H2 zinc finger...	0.02	Archaeplastida
Gb_17210	No alias	transcription factor (DREB). C2H2 zinc finger...	0.04	Archaeplastida
Gb_17211	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_17212	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_34285	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_35474	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_35633	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_36010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_38187	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g07120.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g54890.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os03g08500.2	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os05g36100.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g41760.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os08g07700.1	No alias	Ethylene-responsive transcription factor ERF087...	0.02	Archaeplastida
LOC_Os10g41130.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_1037g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_40048g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_4032g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_484878g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_5530g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_66442g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_7166g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_9160409g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_9260020g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_928517g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp1g20040.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Pp3c12_25330V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g090300.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc01g090370.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g077370.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g095977.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc04g072300.1.1	No alias	Ethylene-responsive transcription factor FZP OS=Oryza...	0.03	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g051840.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc06g068360.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc08g078180.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc09g089910.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.05	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc10g076380.2.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
Zm00001e003707_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e003800_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e006982_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e007352_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e014008_P002	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.04	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e016064_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e019159_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e019567_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e025840_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e025999_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e026192_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e027351_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e029765_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e032033_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.03	Archaeplastida
Zm00001e036130_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Zm00001e041539_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e041620_P002	No alias	transcription factor (ERF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Neighborhood
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006534	cysteine metabolic process	IEP	Neighborhood
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Neighborhood
BP	GO:0006563	L-serine metabolic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
MF	GO:0009001	serine O-acetyltransferase activity	IEP	Neighborhood
BP	GO:0009069	serine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009119	ribonucleoside metabolic process	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016412	serine O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016413	O-acetyltransferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
BP	GO:0019344	cysteine biosynthetic process	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Neighborhood
BP	GO:0042278	purine nucleoside metabolic process	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Neighborhood
MF	GO:1901681	sulfur compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	67	116

External Links

No external refs found!

AMTR_s00023p00044590 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation