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  5. Solyc02g086480.1.1

Solyc02g086480.1.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g086480.1.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00227160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AT1G06280 LBD2 LOB domain-containing protein 2 0.03 Archaeplastida
AT1G07900 LBD1 LOB domain-containing protein 1 0.03 Archaeplastida
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.04 Archaeplastida
AT1G31320 LBD4 LOB domain-containing protein 4 0.04 Archaeplastida
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
AT2G28500 LBD11 LOB domain-containing protein 11 0.04 Archaeplastida
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.04 Archaeplastida
GSVIVT01003547001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01013631001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.12 Archaeplastida
GSVIVT01016332001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01016335001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
GSVIVT01020353001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01024662001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01032415001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.11 Archaeplastida
Gb_13424 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_19390 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Gb_20676 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida
Gb_21109 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_38978 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Gb_40767 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os03g17810.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os11g01550.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os12g01550.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_10430986g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_10434193g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_88711g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Mp1g14500.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Mp4g10500.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Mp5g17820.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc02g065150.2.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc06g082310.3.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc12g010810.1.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 12 108
No external refs found!