Description : Zinc finger CCCH domain-containing protein 41 OS=Arabidopsis thaliana (sp|q9lvx1|c3h41_arath : 365.0)
Gene families : OG0003907 (Archaeplastida) Phylogenetic Tree(s): OG0003907_tree ,
OG_05_0003938 (LandPlants) Phylogenetic Tree(s): OG_05_0003938_tree ,
OG_06_0005927 (SeedPlants) Phylogenetic Tree(s): OG_06_0005927_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc02g086510.4.1 | |
Cluster | HCCA: Cluster_264 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Gb_29092 | No alias | Zinc finger CCCH domain-containing protein 27 OS=Oryza... | 0.02 | Archaeplastida | |
LOC_Os04g32340.1 | No alias | Zinc finger CCCH domain-containing protein 27 OS=Oryza... | 0.03 | Archaeplastida | |
Smo437689 | No alias | Zinc finger CCCH domain-containing protein 27 OS=Oryza... | 0.03 | Archaeplastida | |
Zm00001e008334_P001 | No alias | Zinc finger CCCH domain-containing protein 27 OS=Oryza... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005516 | calmodulin binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Neighborhood |
BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0007186 | G-protein coupled receptor signaling pathway | IEP | Neighborhood |
CC | GO:0008023 | transcription elongation factor complex | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
BP | GO:0016042 | lipid catabolic process | IEP | Neighborhood |
BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
BP | GO:0016570 | histone modification | IEP | Neighborhood |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 242 | 304 |
No external refs found! |