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  5. Solyc02g087120.4.1

Solyc02g087120.4.1


Description : Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis thaliana (sp|q9lrs2|tbl22_arath : 199.0)


Gene families : OG0000288 (Archaeplastida) Phylogenetic Tree(s): OG0000288_tree ,
OG_05_0107841 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0085590 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g087120.4.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266030 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00006p00266110 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G70230 TBL27 TRICHOME BIREFRINGENCE-LIKE 27 0.03 Archaeplastida
AT5G51640 YLS7, TBL17 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
GSVIVT01036469001 No alias Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os01g46400.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os06g12820.1 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os06g16200.1 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os09g20850.1 No alias xyloglucan O-acetyltransferase (AXY4) 0.02 Archaeplastida
Pp3c16_10090V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida
Pp3c2_37020V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida
Smo418889 No alias Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc03g046270.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e009759_P001 No alias xyloglucan O-acetyltransferase (AXY4) 0.04 Archaeplastida
Zm00001e020949_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036802_P001 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 134 271
IPR025846 PMR5_N_dom 78 132
No external refs found!