Solyc03g006000.3.1


Description : transcription factor (HSF)


Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0000053 (LandPlants) Phylogenetic Tree(s): OG_05_0000053_tree ,
OG_06_0006541 (SeedPlants) Phylogenetic Tree(s): OG_06_0006541_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g006000.3.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 Archaeplastida
AMTR_s00013p00262410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
AMTR_s00040p00209530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.05 Archaeplastida
AMTR_s00069p00068180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
AMTR_s00132p00118400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.06 Archaeplastida
AMTR_s00176p00025440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
AT1G67970 HSFA8, AT-HSFA8 heat shock transcription factor A8 0.02 Archaeplastida
AT4G18880 HSF A4A, AT-HSFA4A heat shock transcription factor A4A 0.08 Archaeplastida
AT4G36990 HSF4, HSFB1,... heat shock factor 4 0.03 Archaeplastida
AT5G45710 HSFA4C, RHA1, AT-HSFA4C winged-helix DNA-binding transcription factor family protein 0.04 Archaeplastida
GSVIVT01020781001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.09 Archaeplastida
GSVIVT01021269001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.05 Archaeplastida
GSVIVT01022134001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.09 Archaeplastida
LOC_Os02g29340.1 No alias transcription factor (HSF) 0.03 Archaeplastida
LOC_Os03g12370.1 No alias transcription factor (HSF) 0.08 Archaeplastida
LOC_Os05g45410.1 No alias transcription factor (HSF) 0.03 Archaeplastida
LOC_Os09g28354.1 No alias transcription factor (HSF) 0.04 Archaeplastida
MA_43896g0010 No alias Heat stress transcription factor A-1 OS=Oryza sativa... 0.05 Archaeplastida
MA_5374g0010 No alias transcription factor (HSF) 0.06 Archaeplastida
Pp3c1_32480V3.1 No alias heat shock factor 3 0.02 Archaeplastida
Pp3c7_4270V3.1 No alias heat shock transcription factor B4 0.02 Archaeplastida
Pp3c7_7720V3.1 No alias heat shock transcription factor A1E 0.06 Archaeplastida
Smo93081 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
Zm00001e005982_P001 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e027464_P001 No alias transcription factor (HSF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 14 103
No external refs found!