AT1G36060

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000849 (SeedPlants) Phylogenetic Tree(s): OG_06_0000849_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G36060
Cluster	HCCA: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00010p00098700	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.02	Archaeplastida
AMTR_s00023p00044590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G75490	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G78080	RAP2.4	related to AP2 4	0.04	Archaeplastida
AT2G44940	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.04	Archaeplastida
AT4G32800	No alias	Integrase-type DNA-binding superfamily protein	0.07	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.12	Archaeplastida
GSVIVT01002262001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013913001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01013916001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013920001	No alias	No description available	0.06	Archaeplastida
GSVIVT01015037001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01031388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01032961001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01033795001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_01214	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01217	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_07474	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_07476	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_07992	No alias	Ethylene-responsive transcription factor RAP2-9...	0.02	Archaeplastida
Gb_08035	No alias	transcription factor (DREB)	0.08	Archaeplastida
Gb_11793	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_16683	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_17208	No alias	transcription factor (DREB). C2H2 zinc finger...	0.02	Archaeplastida
Gb_17210	No alias	transcription factor (DREB). C2H2 zinc finger...	0.02	Archaeplastida
Gb_17212	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_24048	No alias	transcription factor (ERF)	0.07	Archaeplastida
Gb_24328	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26855	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26856	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26857	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26858	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26863	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_29168	No alias	Ethylene-responsive transcription factor ERF012...	0.04	Archaeplastida
Gb_32532	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_35474	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_36010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_36992	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g21120.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g46870.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os01g73770.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g42585.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os02g45450.1	No alias	Dehydration-responsive element-binding protein 1G...	0.02	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os02g54050.1	No alias	Ethylene-responsive transcription factor ERF018...	0.03	Archaeplastida
LOC_Os02g55380.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os03g15660.1	No alias	Ethylene-responsive transcription factor ERF012...	0.04	Archaeplastida
LOC_Os04g46440.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g55520.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g28350.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os08g36920.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os09g11460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.05	Archaeplastida
LOC_Os09g28440.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10343854g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_10491g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_164803g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_364562g0010	No alias	transcription factor (DREB)	0.07	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_420358g0010	No alias	Ethylene-responsive transcription factor 1A...	0.02	Archaeplastida
MA_425410g0010	No alias	Ethylene-responsive transcription factor RAP2-13...	0.04	Archaeplastida
MA_5629699g0010	No alias	transcription factor (DREB)	0.11	Archaeplastida
MA_9260020g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_9565296g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_9565555g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.02	Archaeplastida
MA_96512g0020	No alias	Ethylene-responsive transcription factor ERF071...	0.09	Archaeplastida
MA_99821g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp4g00380.1	No alias	no hits & (original description: none)	0.07	Archaeplastida
Mp5g06970.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Pp3c13_4270V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c14_3280V3.1	No alias	cytokinin response factor 2	0.04	Archaeplastida
Pp3c1_7740V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c3_31490V3.1	No alias	C-repeat-binding factor 4	0.02	Archaeplastida
Pp3c3_31500V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c4_31920V3.1	No alias	ethylene responsive element binding factor 1	0.05	Archaeplastida
Pp3c7_1240V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
Pp3c7_2300V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Smo104980	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Solyc01g108240.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g124110.2.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.03	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc06g035700.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc12g008350.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc12g056590.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e001139_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.05	Archaeplastida
Zm00001e015968_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e019566_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e021282_P001	No alias	transcription factor (DREB)	0.07	Archaeplastida
Zm00001e023149_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e023157_P001	No alias	transcription factor (DREB)	0.07	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
Zm00001e023804_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
Zm00001e023816_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e027350_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e029765_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.03	Archaeplastida
Zm00001e033072_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
Zm00001e038525_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Archaeplastida
Zm00001e039555_P001	No alias	no hits & (original description: none)	0.08	Archaeplastida
Zm00001e041532_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	TAS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005634	nucleus	IC	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000412	histone peptidyl-prolyl isomerization	IEP	Neighborhood
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005385	zinc ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005527	macrolide binding	IEP	Neighborhood
MF	GO:0005528	FK506 binding	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006829	zinc ion transport	IEP	Neighborhood
BP	GO:0006862	nucleotide transport	IEP	Neighborhood
BP	GO:0006875	cellular metal ion homeostasis	IEP	Neighborhood
BP	GO:0006882	cellular zinc ion homeostasis	IEP	Neighborhood
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009062	fatty acid catabolic process	IEP	Neighborhood
CC	GO:0009543	chloroplast thylakoid lumen	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015696	ammonium transport	IEP	Neighborhood
BP	GO:0015748	organophosphate ester transport	IEP	Neighborhood
BP	GO:0015802	basic amino acid transport	IEP	Neighborhood
BP	GO:0015931	nucleobase-containing compound transport	IEP	Neighborhood
BP	GO:0016042	lipid catabolic process	IEP	Neighborhood
BP	GO:0016054	organic acid catabolic process	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
BP	GO:0016925	protein sumoylation	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
CC	GO:0031977	thylakoid lumen	IEP	Neighborhood
CC	GO:0031978	plastid thylakoid lumen	IEP	Neighborhood
BP	GO:0043090	amino acid import	IEP	Neighborhood
BP	GO:0043269	regulation of ion transport	IEP	Neighborhood
BP	GO:0044242	cellular lipid catabolic process	IEP	Neighborhood
BP	GO:0044282	small molecule catabolic process	IEP	Neighborhood
BP	GO:0046395	carboxylic acid catabolic process	IEP	Neighborhood
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Neighborhood
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood
BP	GO:0055065	metal ion homeostasis	IEP	Neighborhood
BP	GO:0055069	zinc ion homeostasis	IEP	Neighborhood
BP	GO:0055076	transition metal ion homeostasis	IEP	Neighborhood
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Neighborhood
BP	GO:0072503	cellular divalent inorganic cation homeostasis	IEP	Neighborhood
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	Neighborhood
MF	GO:0072509	divalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0098771	inorganic ion homeostasis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	143	191

External Links

No external refs found!

AT1G36060

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation