- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 142.0)
Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Solyc01g066445.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | Archaeplastida | |
| Solyc02g030461.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.03 | Archaeplastida | |
| Solyc03g044024.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.02 | Archaeplastida | |
| Solyc03g083485.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.03 | Archaeplastida | |
| Solyc05g013617.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.05 | Archaeplastida | |
| Solyc05g015493.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.04 | Archaeplastida | |
| Solyc06g048683.1.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| Solyc06g048825.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.06 | Archaeplastida | |
| Solyc09g018285.1.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Solyc09g075965.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.07 | Archaeplastida | |
| Solyc10g074433.1.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| Solyc10g074824.1.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
| MF | GO:0005047 | signal recognition particle binding | IEP | Neighborhood |
| MF | GO:0005048 | signal sequence binding | IEP | Neighborhood |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Neighborhood |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Neighborhood |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Neighborhood |
| BP | GO:0006030 | chitin metabolic process | IEP | Neighborhood |
| BP | GO:0006032 | chitin catabolic process | IEP | Neighborhood |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Neighborhood |
| BP | GO:0006605 | protein targeting | IEP | Neighborhood |
| BP | GO:0006612 | protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| MF | GO:0008017 | microtubule binding | IEP | Neighborhood |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
| MF | GO:0008312 | 7S RNA binding | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| CC | GO:0009507 | chloroplast | IEP | Neighborhood |
| CC | GO:0009536 | plastid | IEP | Neighborhood |
| MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Neighborhood |
| MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
| BP | GO:0034613 | cellular protein localization | IEP | Neighborhood |
| MF | GO:0042277 | peptide binding | IEP | Neighborhood |
| BP | GO:0042737 | drug catabolic process | IEP | Neighborhood |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Neighborhood |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
| BP | GO:0045047 | protein targeting to ER | IEP | Neighborhood |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Neighborhood |
| CC | GO:0048500 | signal recognition particle | IEP | Neighborhood |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Neighborhood |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0072657 | protein localization to membrane | IEP | Neighborhood |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Neighborhood |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Neighborhood |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Neighborhood |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 1 | 72 |
| No external refs found! |