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  5. Solyc03g096360.4.1

Solyc03g096360.4.1


Description : component RPL35a of LSU proteome component


Gene families : OG0001985 (Archaeplastida) Phylogenetic Tree(s): OG0001985_tree ,
OG_05_0001931 (LandPlants) Phylogenetic Tree(s): OG_05_0001931_tree ,
OG_06_0002428 (SeedPlants) Phylogenetic Tree(s): OG_06_0002428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g096360.4.1
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00195890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
AT1G07070 No alias Ribosomal protein L35Ae family protein 0.08 Archaeplastida
AT1G41880 No alias Ribosomal protein L35Ae family protein 0.17 Archaeplastida
AT1G74270 No alias Ribosomal protein L35Ae family protein 0.1 Archaeplastida
AT3G55750 No alias Ribosomal protein L35Ae family protein 0.07 Archaeplastida
Cpa|evm.model.tig00020723.23 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
Cre10.g459250 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
GSVIVT01016386001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 Archaeplastida
GSVIVT01034025001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
Gb_35488 No alias component RPL35a of LSU proteome component 0.11 Archaeplastida
LOC_Os02g54470.1 No alias component RPL35a of LSU proteome component 0.14 Archaeplastida
MA_79041g0010 No alias component RPL35a of LSU proteome component 0.06 Archaeplastida
Mp1g11470.1 No alias component RPL35a of LSU proteome component 0.23 Archaeplastida
Pp3c11_9630V3.1 No alias Ribosomal protein L35Ae family protein 0.09 Archaeplastida
Pp3c13_8360V3.1 No alias Ribosomal protein L35Ae family protein 0.15 Archaeplastida
Pp3c1_4030V3.1 No alias Ribosomal protein L35Ae family protein 0.04 Archaeplastida
Pp3c3_3480V3.1 No alias Ribosomal protein L35Ae family protein 0.17 Archaeplastida
Pp3c4_29970V3.1 No alias Ribosomal protein L35Ae family protein 0.07 Archaeplastida
Pp3c7_17970V3.1 No alias Ribosomal protein L35Ae family protein 0.15 Archaeplastida
Smo184773 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
Zm00001e009729_P001 No alias component RPL35a of LSU proteome component 0.23 Archaeplastida
Zm00001e023741_P003 No alias component RPL35a of LSU proteome component 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 12 99
No external refs found!