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  5. AMTR_s00024p00139650

AMTR_s00024p00139650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.87

Description : Secondary metabolism.nitrogen-containing secondary compounds.alkaloids.indole alkaloid synthesis.aromatic L-amino acid decarboxylase


Gene families : OG0000816 (Archaeplastida) Phylogenetic Tree(s): OG0000816_tree ,
OG_05_0000577 (LandPlants) Phylogenetic Tree(s): OG_05_0000577_tree ,
OG_06_0000434 (SeedPlants) Phylogenetic Tree(s): OG_06_0000434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00139650
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00229630 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00092p00055440 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.03 Archaeplastida
AMTR_s00092p00059730 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.03 Archaeplastida
LOC_Os05g43510.1 No alias aromatic L-amino acid decarboxylase 0.03 Archaeplastida
LOC_Os10g23900.1 No alias aromatic L-amino acid decarboxylase 0.04 Archaeplastida
LOC_Os10g26110.1 No alias aromatic L-amino acid decarboxylase 0.02 Archaeplastida
Solyc03g045020.4.1 No alias aromatic L-amino acid decarboxylase 0.02 Archaeplastida
Solyc07g054280.1.1 No alias aromatic L-amino acid decarboxylase 0.03 Archaeplastida
Zm00001e000634_P001 No alias aromatic L-amino acid decarboxylase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0008987 quinolinate synthetase A activity IEP Neighborhood
BP GO:0009435 NAD biosynthetic process IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0019674 NAD metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 303 373
IPR002129 PyrdxlP-dep_de-COase 172 302
IPR002129 PyrdxlP-dep_de-COase 51 170
No external refs found!