Solyc03g117720.3.1

Description : transcription factor (AP2)

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g117720.3.1
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00227390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00101p00022740	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G51190	PLT2	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G57390	AIL5, EMK, CHO1	AINTEGUMENTA-like 5	0.03	Archaeplastida
AT5G67180	TOE3	target of early activation tagged (EAT) 3	0.04	Archaeplastida
Cre08.g385350	No alias	No description available	0.02	Archaeplastida
Cre09.g390957	No alias	No description available	0.02	Archaeplastida
Cre17.g729600	No alias	No description available	0.02	Archaeplastida
GSVIVT01016097001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.11	Archaeplastida
GSVIVT01023697001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_18139	No alias	transcription factor (AP2)	0.05	Archaeplastida
Gb_36842	No alias	transcription factor (AP2)	0.02	Archaeplastida
Gb_39931	No alias	transcription factor (AP2)	0.03	Archaeplastida
Gb_41702	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os03g19900.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
LOC_Os04g55560.2	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os07g13170.2	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os08g34360.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os11g03540.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_10005612g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_113625g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_130948g0020	No alias	transcription factor (AP2)	0.04	Archaeplastida
MA_196219g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_8090186g0010	No alias	transcription factor (AP2)	0.04	Archaeplastida
MA_86195g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_95471g0010	No alias	transcription factor (AP2)	0.07	Archaeplastida
Mp7g13270.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Pp3c10_24550V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c12_12460V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c23_13360V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c9_25400V3.1	No alias	AINTEGUMENTA-like 5	0.03	Archaeplastida
Solyc04g049800.3.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
Zm00001e024044_P002	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e034197_P002	No alias	transcription factor (AP2)	0.07	Archaeplastida
Zm00001e037501_P005	No alias	transcription factor (AP2)	0.06	Archaeplastida
Zm00001e041782_P003	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016289	CoA hydrolase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	158	209
IPR001471	AP2/ERF_dom	57	115

External Links

No external refs found!

Solyc03g117720.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation