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  5. Solyc03g117850.4.1

Solyc03g117850.4.1


Description : Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea (sp|p10871|rca_spiol : 141.0)


Gene families : OG0001377 (Archaeplastida) Phylogenetic Tree(s): OG0001377_tree ,
OG_05_0006554 (LandPlants) Phylogenetic Tree(s): OG_05_0006554_tree ,
OG_06_0006946 (SeedPlants) Phylogenetic Tree(s): OG_06_0006946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g117850.4.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00255830 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 Archaeplastida
AT1G73110 No alias P-loop containing nucleoside triphosphate hydrolases... 0.08 Archaeplastida
AT2G39730 RCA rubisco activase 0.13 Archaeplastida
Cpa|evm.model.tig00020848.91 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.03 Archaeplastida
Cre04.g229300 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 Archaeplastida
GSVIVT01016062001 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.16 Archaeplastida
GSVIVT01024910001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.11 Archaeplastida
GSVIVT01034123001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.07 Archaeplastida
Gb_37968 No alias ATP-dependent activase involved in RuBisCo regulation 0.08 Archaeplastida
LOC_Os04g56320.1 No alias Ribulose bisphosphate carboxylase/oxygenase activase 2,... 0.07 Archaeplastida
LOC_Os11g47970.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.06 Archaeplastida
MA_10428784g0010 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.05 Archaeplastida
MA_10433855g0010 No alias ATP-dependent activase involved in RuBisCo regulation 0.08 Archaeplastida
MA_379291g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp2g04090.1 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 Archaeplastida
Mp3g03990.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.11 Archaeplastida
Pp3c15_12410V3.1 No alias rubisco activase 0.15 Archaeplastida
Pp3c4_22100V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.09 Archaeplastida
Pp3c9_5280V3.1 No alias rubisco activase 0.01 Archaeplastida
Pp3c9_5310V3.1 No alias rubisco activase 0.11 Archaeplastida
Smo268623 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.06 Archaeplastida
Smo82367 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.07 Archaeplastida
Zm00001e020928_P001 No alias ATP-dependent activase involved in RuBisCo regulation 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006536 glutamate metabolic process IEP Neighborhood
BP GO:0006537 glutamate biosynthetic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0015930 glutamate synthase activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!