Solyc03g121400.1.1


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g121400.1.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AMTR_s00030p00153440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00119p00099150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G21340 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT1G51700 ADOF1, DOF1 DOF zinc finger protein 1 0.07 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.08 Archaeplastida
AT3G55370 OBP3 OBF-binding protein 3 0.04 Archaeplastida
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.06 Archaeplastida
AT5G60850 OBP4 OBF binding protein 4 0.02 Archaeplastida
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
GSVIVT01002242001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01016887001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01027184001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01034189001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01038591001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Gb_09906 No alias transcription factor (DOF) 0.03 Archaeplastida
Gb_20144 No alias transcription factor (DOF) 0.03 Archaeplastida
Gb_23562 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os01g09720.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os01g48290.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os01g55340.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.07 Archaeplastida
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os08g38220.1 No alias transcription factor (DOF) 0.15 Archaeplastida
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_16692g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_248613g0010 No alias No annotation 0.02 Archaeplastida
MA_97259g0020 No alias transcription factor (DOF) 0.02 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Pp3c16_6460V3.1 No alias cycling DOF factor 2 0.08 Archaeplastida
Pp3c17_23300V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Pp3c17_3860V3.1 No alias OBF binding protein 4 0.04 Archaeplastida
Pp3c17_7930V3.1 No alias cycling DOF factor 2 0.02 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.06 Archaeplastida
Solyc02g077960.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc06g062520.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc06g071480.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.07 Archaeplastida
Solyc08g082910.2.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc10g009360.4.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e001988_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e004476_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e004809_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e010022_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e011750_P002 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e015701_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e027411_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e027634_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e028672_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 18 74
No external refs found!