Solyc04g008610.3.1

Description : histone acetyltransferase (HAC/HPCAT)

Gene families : OG0001417 (Archaeplastida) Phylogenetic Tree(s): OG0001417_tree ,
OG_05_0001785 (LandPlants) Phylogenetic Tree(s): OG_05_0001785_tree ,
OG_06_0002282 (SeedPlants) Phylogenetic Tree(s): OG_06_0002282_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g008610.3.1
Cluster	HCCA: Cluster_182

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00079p00078710	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.TAZ histone...	0.15	Archaeplastida
AT1G16710	HAC12	histone acetyltransferase of the CBP family 12	0.16	Archaeplastida
AT1G55970	HAC4, HAG04,...	histone acetyltransferase of the CBP family 4	0.03	Archaeplastida
AT1G79000	ATHPCAT2, HAC1,...	histone acetyltransferase of the CBP family 1	0.13	Archaeplastida
AT3G12980	ATHPCAT4, HAC5	histone acetyltransferase of the CBP family 5	0.07	Archaeplastida
GSVIVT01029442001	No alias	RNA biosynthesis.transcriptional activation.TAZ histone...	0.17	Archaeplastida
Gb_02923	No alias	histone acetyltransferase (HAC/HPCAT). component KIX of...	0.06	Archaeplastida
Gb_24654	No alias	histone acetyltransferase (HAC/HPCAT). component KIX of...	0.08	Archaeplastida
Gb_41266	No alias	component KIX of PPD-KIX transcriptional repressor complex	0.05	Archaeplastida
Gb_41268	No alias	histone acetyltransferase (HAC/HPCAT)	0.03	Archaeplastida
LOC_Os01g14370.1	No alias	histone acetyltransferase (HAC/HPCAT)	0.08	Archaeplastida
LOC_Os02g04490.1	No alias	histone acetyltransferase (HAC/HPCAT)	0.1	Archaeplastida
MA_13363g0010	No alias	histone acetyltransferase (HAC/HPCAT)	0.1	Archaeplastida
MA_8978g0010	No alias	histone acetyltransferase (HAC/HPCAT)	0.08	Archaeplastida
Mp2g22480.1	No alias	histone acetyltransferase (HAC/HPCAT). component KIX of...	0.1	Archaeplastida
Pp3c12_3460V3.1	No alias	histone acetyltransferase of the CBP family 1	0.12	Archaeplastida
Pp3c17_2460V3.1	No alias	histone acetyltransferase of the CBP family 1	0.19	Archaeplastida
Smo180368	No alias	RNA biosynthesis.transcriptional activation.TAZ histone...	0.09	Archaeplastida
Zm00001e013612_P001	No alias	histone acetyltransferase (HAC/HPCAT)	0.24	Archaeplastida
Zm00001e018020_P001	No alias	No annotation	0.19	Archaeplastida
Zm00001e025338_P001	No alias	histone acetyltransferase (HAC/HPCAT)	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004402	histone acetyltransferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006473	protein acetylation	None	Extended
BP	GO:0006475	internal protein amino acid acetylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008080	N-acetyltransferase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016407	acetyltransferase activity	None	Extended
MF	GO:0016410	N-acyltransferase activity	None	Extended
BP	GO:0016569	covalent chromatin modification	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016573	histone acetylation	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0018393	internal peptidyl-lysine acetylation	None	Extended
BP	GO:0018394	peptidyl-lysine acetylation	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
MF	GO:0034212	peptide N-acetyltransferase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043543	protein acylation	None	Extended
CC	GO:0044217	other organism part	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Neighborhood
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004540	ribonuclease activity	IEP	Neighborhood
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005643	nuclear pore	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006401	RNA catabolic process	IEP	Neighborhood
BP	GO:0006402	mRNA catabolic process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006913	nucleocytoplasmic transport	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0010921	regulation of phosphatase activity	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
BP	GO:0016579	protein deubiquitination	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
MF	GO:0016779	nucleotidyltransferase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0017056	structural constituent of nuclear pore	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
MF	GO:0019902	phosphatase binding	IEP	Neighborhood
MF	GO:0019903	protein phosphatase binding	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
BP	GO:0031399	regulation of protein modification process	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0035303	regulation of dephosphorylation	IEP	Neighborhood
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Neighborhood
MF	GO:0042393	histone binding	IEP	Neighborhood
BP	GO:0043631	RNA polyadenylation	IEP	Neighborhood
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Neighborhood
CC	GO:0044428	nuclear part	IEP	Neighborhood
CC	GO:0044451	nucleoplasm part	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
BP	GO:0051169	nuclear transport	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051336	regulation of hydrolase activity	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
MF	GO:0070566	adenylyltransferase activity	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013178	Histone_AcTrfase_Rtt109/CBP	1075	1290
IPR000197	Znf_TAZ	1542	1612
IPR000197	Znf_TAZ	593	661
IPR019787	Znf_PHD-finger	975	1017
IPR000433	Znf_ZZ	1474	1513

External Links

No external refs found!

Solyc04g008610.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation