Solyc04g016000.3.1

Description : transcription factor (HSF)

Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0000053 (LandPlants) Phylogenetic Tree(s): OG_05_0000053_tree ,
OG_06_0000104 (SeedPlants) Phylogenetic Tree(s): OG_06_0000104_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g016000.3.1
Cluster	HCCA: Cluster_280

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00068180	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AMTR_s00073p00033500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AMTR_s00132p00118400	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
AT2G41690	AT-HSFB3, HSFB3	heat shock transcription factor B3	0.06	Archaeplastida
AT4G11660	AT-HSFB2B, HSFB2B	winged-helix DNA-binding transcription factor family protein	0.04	Archaeplastida
AT4G18880	HSF A4A, AT-HSFA4A	heat shock transcription factor A4A	0.03	Archaeplastida
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.1	Archaeplastida
AT5G43840	HSFA6A, AT-HSFA6A	heat shock transcription factor A6A	0.03	Archaeplastida
AT5G62020	AT-HSFB2A, HSFB2A	heat shock transcription factor B2A	0.03	Archaeplastida
GSVIVT01002066001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.06	Archaeplastida
GSVIVT01018041001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
GSVIVT01020781001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01033257001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.08	Archaeplastida
Gb_00558	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.02	Archaeplastida
LOC_Os03g06630.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os03g25120.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
LOC_Os05g45410.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
LOC_Os08g36700.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
LOC_Os09g28354.1	No alias	transcription factor (HSF)	0.05	Archaeplastida
MA_110587g0010	No alias	transcription factor (HSF)	0.05	Archaeplastida
MA_5374g0010	No alias	transcription factor (HSF)	0.04	Archaeplastida
MA_8992661g0010	No alias	transcription factor (HSF)	0.05	Archaeplastida
MA_9434330g0010	No alias	transcription factor (HSF)	0.03	Archaeplastida
Pp3c18_9360V3.1	No alias	heat shock transcription factor B4	0.04	Archaeplastida
Smo93081	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
Solyc02g090820.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc03g026020.3.1	No alias	transcription factor (HSF)	0.07	Archaeplastida
Solyc06g053960.3.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
Solyc07g055710.3.1	No alias	transcription factor (HSF)	0.05	Archaeplastida
Solyc09g082670.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc10g079380.2.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
Zm00001e009944_P001	No alias	transcription factor (HSF)	0.02	Archaeplastida
Zm00001e034345_P001	No alias	transcription factor (HSF)	0.04	Archaeplastida
Zm00001e035680_P002	No alias	transcription factor (HSF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
CC	GO:0044217	other organism part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
MF	GO:0004602	glutathione peroxidase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005102	signaling receptor binding	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0006022	aminoglycan metabolic process	IEP	Neighborhood
BP	GO:0006026	aminoglycan catabolic process	IEP	Neighborhood
BP	GO:0006030	chitin metabolic process	IEP	Neighborhood
BP	GO:0006032	chitin catabolic process	IEP	Neighborhood
BP	GO:0006040	amino sugar metabolic process	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
MF	GO:0008083	growth factor activity	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0008283	cell proliferation	IEP	Neighborhood
MF	GO:0008483	transaminase activity	IEP	Neighborhood
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015696	ammonium transport	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Neighborhood
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Neighborhood
MF	GO:0018580	nitronate monooxygenase activity	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
MF	GO:0030545	receptor regulator activity	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0046348	amino sugar catabolic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048018	receptor ligand activity	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	29	118

External Links

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Solyc04g016000.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation