Solyc04g025030.1.1

Description : transcription factor (MADS/AGL)

Gene families : OG0012663 (Archaeplastida) Phylogenetic Tree(s): OG0012663_tree ,
OG_05_0012476 (LandPlants) Phylogenetic Tree(s): OG_05_0012476_tree ,
OG_06_0012550 (SeedPlants) Phylogenetic Tree(s): OG_06_0012550_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g025030.1.1
Cluster	HCCA: Cluster_129

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc04g025090.1.1	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
CC	GO:0044451	nucleoplasm part	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	17	59

External Links

No external refs found!