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Description : transcription factor (MADS/AGL)
Gene families : OG0007582 (Archaeplastida) Phylogenetic Tree(s): OG0007582_tree ,
OG_05_0005641 (LandPlants) Phylogenetic Tree(s): OG_05_0005641_tree ,
OG_06_0003653 (SeedPlants) Phylogenetic Tree(s): OG_06_0003653_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g025970.1.1 | |
| Cluster | HCCA: Cluster_67 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Solyc03g033570.1.1 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| Solyc03g033890.1.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc03g033940.1.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc06g059780.1.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc10g018070.1.1 | No alias | transcription factor (MADS/AGL) | 0.01 | Archaeplastida | |
| Solyc10g038040.1.1 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005047 | signal recognition particle binding | IEP | Neighborhood |
| MF | GO:0005048 | signal sequence binding | IEP | Neighborhood |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Neighborhood |
| BP | GO:0006605 | protein targeting | IEP | Neighborhood |
| BP | GO:0006612 | protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| MF | GO:0008312 | 7S RNA binding | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
| MF | GO:0042277 | peptide binding | IEP | Neighborhood |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Neighborhood |
| BP | GO:0045047 | protein targeting to ER | IEP | Neighborhood |
| CC | GO:0048500 | signal recognition particle | IEP | Neighborhood |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Neighborhood |
| BP | GO:0072657 | protein localization to membrane | IEP | Neighborhood |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 16 | 63 |
| No external refs found! |