1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g050745.1.1

Solyc04g050745.1.1


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 154.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001291 (LandPlants) Phylogenetic Tree(s): OG_05_0001291_tree ,
OG_06_0001454 (SeedPlants) Phylogenetic Tree(s): OG_06_0001454_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g050745.1.1

Target Alias Description ECC score Gene Family Method Actions
Gb_21346 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 Archaeplastida
Solyc02g014525.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc02g044005.1.1 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Solyc05g025925.1.1 No alias No annotation 0.02 Archaeplastida
Solyc09g150114.1.1 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Solyc12g062826.1.1 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000477 RT_dom 2 122
No external refs found!