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  5. Solyc04g074190.3.1

Solyc04g074190.3.1


Description : clade F phosphatase


Gene families : OG0000213 (Archaeplastida) Phylogenetic Tree(s): OG0000213_tree ,
OG_05_0000775 (LandPlants) Phylogenetic Tree(s): OG_05_0000775_tree ,
OG_06_0004383 (SeedPlants) Phylogenetic Tree(s): OG_06_0004383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g074190.3.1
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00232020 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.serine/threonine... 0.02 Archaeplastida
Cpa|evm.model.tig00000826.21 No alias Probable protein phosphatase 2C 10 OS=Oryza sativa... 0.01 Archaeplastida
MA_10434726g0010 No alias Probable protein phosphatase 2C 59 OS=Arabidopsis... 0.03 Archaeplastida
Smo227813 No alias Protein modification.dephosphorylation.serine/threonine... 0.04 Archaeplastida
Solyc01g105280.3.1 No alias clade F phosphatase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 39 270
No external refs found!