1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g076550.3.1

Solyc04g076550.3.1


Description : Protein SABRE OS=Arabidopsis thaliana (sp|q6imt1|sab_arath : 515.0)


Gene families : OG0002914 (Archaeplastida) Phylogenetic Tree(s): OG0002914_tree ,
OG_05_0004076 (LandPlants) Phylogenetic Tree(s): OG_05_0004076_tree ,
OG_06_0003924 (SeedPlants) Phylogenetic Tree(s): OG_06_0003924_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g076550.3.1
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
AT1G58250 SAB Golgi-body localisation protein domain ;RNA pol II... 0.03 Archaeplastida
Gb_21610 No alias microtubule orientation-stabilizing factor (SABRE) 0.03 Archaeplastida
MA_10307911g0010 No alias Protein KINKY POLLEN OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10435339g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10435593g0010 No alias Protein SABRE OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_36795g0020 No alias Protein SABRE OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_54574g0010 No alias Protein SABRE OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c12_12980V3.1 No alias Golgi-body localisation protein domain ;RNA pol II... 0.04 Archaeplastida
Smo146641 No alias Cell cycle.cytokinesis.preprophase microtubule... 0.03 Archaeplastida
Zm00001e005147_P002 No alias microtubule orientation-stabilizing factor (SABRE) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!