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  5. Solyc05g009980.4.1

Solyc05g009980.4.1


Description : Protein decapping 5 OS=Arabidopsis thaliana (sp|q9c658|dcp5_arath : 189.0)


Gene families : OG0002072 (Archaeplastida) Phylogenetic Tree(s): OG0002072_tree ,
OG_05_0002133 (LandPlants) Phylogenetic Tree(s): OG_05_0002133_tree ,
OG_06_0003260 (SeedPlants) Phylogenetic Tree(s): OG_06_0003260_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g009980.4.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
AT1G26110 DCP5 decapping 5 0.06 Archaeplastida
Mp7g01960.1 No alias regulatory component DCP5 of mRNA decapping complex 0.04 Archaeplastida
Pp3c8_3026V3.1 No alias decapping 5 0.03 Archaeplastida
Zm00001e025652_P002 No alias regulatory component DCP5 of mRNA decapping complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR025609 Lsm14-like_N 18 91
No external refs found!