Solyc05g010755.1.1


Description : no hits & (original description: none)


Gene families : OG0000375 (Archaeplastida) Phylogenetic Tree(s): OG0000375_tree ,
OG_05_0000187 (LandPlants) Phylogenetic Tree(s): OG_05_0000187_tree ,
OG_06_0000080 (SeedPlants) Phylogenetic Tree(s): OG_06_0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g010755.1.1

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500336.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc01g057133.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g105763.1.1 No alias No annotation 0.03 Archaeplastida
Solyc04g150120.1.1 No alias No annotation 0.04 Archaeplastida
Solyc05g048755.1.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc06g005525.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g009785.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc06g031714.1.1 No alias No annotation 0.05 Archaeplastida
Solyc06g060623.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Solyc06g061225.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc07g042553.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc07g150109.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida
Solyc08g065675.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc08g076687.1.1 No alias No annotation 0.04 Archaeplastida
Solyc09g065525.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Solyc10g044988.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc11g032025.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc12g019235.1.1 No alias No annotation 0.03 Archaeplastida
Solyc12g045033.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005047 signal recognition particle binding IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!