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Description : Pentatricopeptide repeat-containing protein At5g57250, mitochondrial OS=Arabidopsis thaliana (sp|q9lvd3|pp434_arath : 390.0)
Gene families : OG0004527 (Archaeplastida) Phylogenetic Tree(s): OG0004527_tree ,
OG_05_0003301 (LandPlants) Phylogenetic Tree(s): OG_05_0003301_tree ,
OG_06_0012083 (SeedPlants) Phylogenetic Tree(s): OG_06_0012083_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc05g013400.4.1 | |
| Cluster | HCCA: Cluster_127 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Neighborhood |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
| CC | GO:0005777 | peroxisome | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0007031 | peroxisome organization | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Neighborhood |
| CC | GO:0042579 | microbody | IEP | Neighborhood |
| BP | GO:0043631 | RNA polyadenylation | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Neighborhood |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 283 | 312 |
| IPR002885 | Pentatricopeptide_repeat | 669 | 691 |
| IPR002885 | Pentatricopeptide_repeat | 241 | 272 |
| IPR002885 | Pentatricopeptide_repeat | 486 | 511 |
| IPR002885 | Pentatricopeptide_repeat | 125 | 159 |
| IPR002885 | Pentatricopeptide_repeat | 522 | 570 |
| IPR002885 | Pentatricopeptide_repeat | 591 | 639 |
| No external refs found! |