Solyc05g052690.4.1


Description : component eIF3f of eIF3 mRNA-to-PIC binding complex


Gene families : OG0003782 (Archaeplastida) Phylogenetic Tree(s): OG0003782_tree ,
OG_05_0005387 (LandPlants) Phylogenetic Tree(s): OG_05_0005387_tree ,
OG_06_0006646 (SeedPlants) Phylogenetic Tree(s): OG_06_0006646_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052690.4.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001355.7 No alias Protein biosynthesis.translation... 0.01 Archaeplastida
LOC_Os05g01450.1 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.02 Archaeplastida
Mp5g18020.1 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.01 Archaeplastida
Zm00001e029699_P001 No alias component eIF3f of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP Neighborhood
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
BP GO:0032048 cardiolipin metabolic process IEP Neighborhood
BP GO:0032049 cardiolipin biosynthetic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046471 phosphatidylglycerol metabolic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
MF GO:0070567 cytidylyltransferase activity IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR024969 Rpn11/EIF3F_C 172 278
IPR000555 JAMM/MPN+_dom 17 121
No external refs found!