Solyc05g054890.4.1

Description : subfamily ABCG transporter

Gene families : OG0002321 (Archaeplastida) Phylogenetic Tree(s): OG0002321_tree ,
OG_05_0001596 (LandPlants) Phylogenetic Tree(s): OG_05_0001596_tree ,
OG_06_0001496 (SeedPlants) Phylogenetic Tree(s): OG_06_0001496_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g054890.4.1
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00181450	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AT2G37360	No alias	ABC-2 type transporter family protein	0.03	Archaeplastida
AT3G55100	No alias	ABC-2 type transporter family protein	0.03	Archaeplastida
AT3G55110	No alias	ABC-2 type transporter family protein	0.04	Archaeplastida
GSVIVT01025582001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Gb_20468	No alias	subfamily ABCG transporter	0.04	Archaeplastida
LOC_Os01g61940.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os03g17350.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os03g17370.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp3g16700.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Pp3c20_6990V3.1	No alias	ABC-2 type transporter family protein	0.02	Archaeplastida
Pp3c8_17020V3.1	No alias	ABC-2 type transporter family protein	0.03	Archaeplastida
Solyc09g005970.1.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e019365_P001	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e028790_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	Neighborhood
MF	GO:0003839	gamma-glutamylcyclotransferase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006749	glutathione metabolic process	IEP	Neighborhood
BP	GO:0006751	glutathione catabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
MF	GO:0008131	primary amine oxidase activity	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009894	regulation of catabolic process	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015696	ammonium transport	IEP	Neighborhood
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Neighborhood
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016842	amidine-lyase activity	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
BP	GO:0042176	regulation of protein catabolic process	IEP	Neighborhood
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	Neighborhood
BP	GO:0043171	peptide catabolic process	IEP	Neighborhood
BP	GO:0044273	sulfur compound catabolic process	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051187	cofactor catabolic process	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0051246	regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0071804	cellular potassium ion transport	IEP	Neighborhood
BP	GO:0071805	potassium ion transmembrane transport	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood
CC	GO:1905368	peptidase complex	IEP	Neighborhood
CC	GO:1905369	endopeptidase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	129	281
IPR013525	ABC_2_trans	447	654

External Links

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Solyc05g054890.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation