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  5. Solyc05g055600.4.1

Solyc05g055600.4.1


Description : component VPS33 of HOPS/CORVET membrane tethering complexes


Gene families : OG0004146 (Archaeplastida) Phylogenetic Tree(s): OG0004146_tree ,
OG_05_0006964 (LandPlants) Phylogenetic Tree(s): OG_05_0006964_tree ,
OG_06_0007213 (SeedPlants) Phylogenetic Tree(s): OG_06_0007213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055600.4.1
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016224001 No alias Vesicle trafficking.target membrane... 0.07 Archaeplastida
LOC_Os04g14654.2 No alias component VPS33 of HOPS/CORVET membrane tethering complexes 0.05 Archaeplastida
Mp4g15500.1 No alias component VPS33 of HOPS/CORVET membrane tethering complexes 0.03 Archaeplastida
Pp3c17_5740V3.1 No alias Sec1/munc18-like (SM) proteins superfamily 0.02 Archaeplastida
Zm00001e027747_P001 No alias component VPS33 of HOPS/CORVET membrane tethering complexes 0.1 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006904 vesicle docking involved in exocytosis IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004725 protein tyrosine phosphatase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016255 attachment of GPI anchor to protein IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019781 NEDD8 activating enzyme activity IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045116 protein neddylation IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
CC GO:0070531 BRCA1-A complex IEP Neighborhood
CC GO:0070552 BRISC complex IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001619 Sec1-like 36 589
No external refs found!