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  5. Solyc06g009210.4.1

Solyc06g009210.4.1


Description : component RPL19 of LSU proteome component


Gene families : OG0001902 (Archaeplastida) Phylogenetic Tree(s): OG0001902_tree ,
OG_05_0002211 (LandPlants) Phylogenetic Tree(s): OG_05_0002211_tree ,
OG_06_0003674 (SeedPlants) Phylogenetic Tree(s): OG_06_0003674_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g009210.4.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00091p00066640 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
AT1G02780 emb2386 Ribosomal protein L19e family protein 0.2 Archaeplastida
AT3G16780 No alias Ribosomal protein L19e family protein 0.08 Archaeplastida
Cpa|evm.model.tig00021181.1 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
Cre02.g075700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01028052001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
GSVIVT01035096001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Gb_23171 No alias component RPL19 of LSU proteome component 0.13 Archaeplastida
Gb_23172 No alias component RPL19 of LSU proteome component 0.12 Archaeplastida
LOC_Os03g21940.1 No alias component RPL19 of LSU proteome component 0.13 Archaeplastida
LOC_Os03g38260.1 No alias component RPL19 of LSU proteome component 0.13 Archaeplastida
MA_1839g0010 No alias component RPL19 of LSU proteome component 0.13 Archaeplastida
MA_22977g0010 No alias component RPL19 of LSU proteome component 0.15 Archaeplastida
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.22 Archaeplastida
Pp3c15_5130V3.1 No alias Ribosomal protein L19e family protein 0.11 Archaeplastida
Pp3c16_410V3.1 No alias Ribosomal protein L19e family protein 0.21 Archaeplastida
Pp3c18_14440V3.1 No alias Ribosomal protein L19e family protein 0.23 Archaeplastida
Pp3c21_11230V3.1 No alias Ribosomal protein L19e family protein 0.2 Archaeplastida
Pp3c22_9980V3.1 No alias Ribosomal protein L19e family protein 0.12 Archaeplastida
Pp3c25_8800V3.1 No alias Ribosomal protein L19e family protein 0.03 Archaeplastida
Pp3c9_14720V3.1 No alias Ribosomal protein L19e family protein 0.18 Archaeplastida
Smo179747 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Smo271656 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Zm00001e013683_P001 No alias component RPL19 of LSU proteome component 0.09 Archaeplastida
Zm00001e020524_P001 No alias component RPL19 of LSU proteome component 0.1 Archaeplastida
Zm00001e025202_P001 No alias component RPL19 of LSU proteome component 0.19 Archaeplastida
Zm00001e036280_P001 No alias component RPL19 of LSU proteome component 0.15 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 146
No external refs found!