1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g034395.1.1

Solyc06g034395.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 126.0)


Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g034395.1.1
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500094.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Solyc00g500354.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Solyc01g065987.1.1 No alias No annotation 0.06 Archaeplastida
Solyc01g066445.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc01g067045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Solyc03g119905.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc04g007855.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc04g064805.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc04g073953.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc04g150146.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Solyc05g015493.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Solyc06g035495.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Solyc06g036255.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc06g048825.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Solyc06g053665.1.1 No alias No annotation 0.05 Archaeplastida
Solyc06g066853.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc07g019493.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc07g044985.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc07g065845.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc08g062725.1.1 No alias No annotation 0.03 Archaeplastida
Solyc08g065543.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g065705.1.1 No alias No annotation 0.05 Archaeplastida
Solyc09g011125.1.1 No alias No annotation 0.05 Archaeplastida
Solyc09g064243.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.05 Archaeplastida
Solyc09g074575.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.11 Archaeplastida
Solyc09g150145.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Solyc10g008455.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc10g038045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Solyc10g074433.1.1 No alias no hits & (original description: none) 0.16 Archaeplastida
Solyc10g074475.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Solyc10g074824.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g012995.1.1 No alias No annotation 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!