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  5. Solyc06g053530.3.1

Solyc06g053530.3.1


Description : Protein NPGR2 OS=Arabidopsis thaliana (sp|q66gn3|npgr2_arath : 627.0)


Gene families : OG0001161 (Archaeplastida) Phylogenetic Tree(s): OG0001161_tree ,
OG_05_0001149 (LandPlants) Phylogenetic Tree(s): OG_05_0001149_tree ,
OG_06_0000795 (SeedPlants) Phylogenetic Tree(s): OG_06_0000795_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g053530.3.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024429001 No alias Vesicle trafficking.target membrane... 0.03 Archaeplastida
GSVIVT01035578001 No alias Protein NPG1 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_10425899g0010 No alias Protein NPGR1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10431586g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8328015g0010 No alias Protein NPG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
InterPro domains Description Start Stop
IPR019734 TPR_repeat 620 652
No external refs found!