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  5. AMTR_s00026p00235000

AMTR_s00026p00235000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00026.129

No description available


Gene families : OG0000400 (Archaeplastida) Phylogenetic Tree(s): OG0000400_tree ,
OG_05_0000199 (LandPlants) Phylogenetic Tree(s): OG_05_0000199_tree ,
OG_06_0000082 (SeedPlants) Phylogenetic Tree(s): OG_06_0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00026p00235000
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00240860 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00015p00058540 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00026p00183720 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00027p00133550 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00031p00150150 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00051p00034040 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00051p00205310 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00055p00086220 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00073p00155730 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00075p00173960 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00080p00183750 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00113p00105950 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00165p00071670 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!