Solyc06g073890.3.1


Description : no hits & (original description: none)


Gene families : OG0002665 (Archaeplastida) Phylogenetic Tree(s): OG0002665_tree ,
OG_05_0001857 (LandPlants) Phylogenetic Tree(s): OG_05_0001857_tree ,
OG_06_0001616 (SeedPlants) Phylogenetic Tree(s): OG_06_0001616_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g073890.3.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01037523001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os11g36430.3 No alias E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.07 Archaeplastida
MA_35039g0010 No alias E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.03 Archaeplastida
Pp3c13_14240V3.1 No alias RING-H2 group F2A 0.03 Archaeplastida
Zm00001e011495_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e024418_P001 No alias E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004061 arylformamidase activity IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070189 kynurenine metabolic process IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!