1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g006300.4.1

Solyc07g006300.4.1


Description : no hits & (original description: none)


Gene families : OG0000368 (Archaeplastida) Phylogenetic Tree(s): OG0000368_tree ,
OG_05_0002595 (LandPlants) Phylogenetic Tree(s): OG_05_0002595_tree ,
OG_06_0003501 (SeedPlants) Phylogenetic Tree(s): OG_06_0003501_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g006300.4.1
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00142280 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
AMTR_s00067p00188650 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.cuticular lipid... 0.05 Archaeplastida
AMTR_s00067p00190600 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.cuticular lipid... 0.05 Archaeplastida
AMTR_s00088p00066300 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
AT1G02190 No alias Fatty acid hydroxylase superfamily 0.04 Archaeplastida
AT1G02205 CER1 Fatty acid hydroxylase superfamily 0.16 Archaeplastida
AT2G37700 No alias Fatty acid hydroxylase superfamily 0.04 Archaeplastida
AT5G57800 CER3, WAX2, YRE, FLP1 Fatty acid hydroxylase superfamily 0.11 Archaeplastida
GSVIVT01016069001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.06 Archaeplastida
GSVIVT01016071001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.04 Archaeplastida
GSVIVT01018419001 No alias Protein ECERIFERUM 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01018420001 No alias Protein ECERIFERUM 1 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01018421001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.09 Archaeplastida
GSVIVT01018423001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.03 Archaeplastida
GSVIVT01023740001 No alias Cell wall.cutin and suberin.cuticular lipid... 0.11 Archaeplastida
Gb_11787 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.05 Archaeplastida
Gb_13363 No alias no description available(sp|q69pa8|glo11_orysj : 168.0) 0.11 Archaeplastida
Gb_13823 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.07 Archaeplastida
Gb_16836 No alias aldehyde-generating component CER3 of CER1-CER3... 0.09 Archaeplastida
Gb_20167 No alias no description available(sp|q6k9f6|glo14_orysj : 188.0) 0.06 Archaeplastida
Gb_23488 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.06 Archaeplastida
Gb_23964 No alias aldehyde-generating component CER3 of CER1-CER3... 0.1 Archaeplastida
Gb_24344 No alias no description available(sp|q6k3d8|glo16_orysj : 165.0) 0.07 Archaeplastida
Gb_32154 No alias aldehyde-generating component CER3 of CER1-CER3... 0.08 Archaeplastida
LOC_Os02g08230.1 No alias aldehyde-generating component CER3 of CER1-CER3... 0.04 Archaeplastida
LOC_Os02g40784.1 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.04 Archaeplastida
LOC_Os09g25850.1 No alias aldehyde-generating component CER3 of CER1-CER3... 0.15 Archaeplastida
MA_10162310g0010 No alias no description available(sp|b8afi3|glo14_orysi : 241.0)... 0.09 Archaeplastida
MA_10429642g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_10432456g0010 No alias Protein ECERIFERUM 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435047g0010 No alias aldehyde-generating component CER3 of CER1-CER3... 0.09 Archaeplastida
MA_10435069g0020 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.09 Archaeplastida
MA_10435519g0010 No alias no description available(sp|b8afi3|glo14_orysi : 187.0) 0.02 Archaeplastida
MA_107531g0010 No alias aldehyde-generating component CER3 of CER1-CER3... 0.07 Archaeplastida
MA_11144g0010 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.06 Archaeplastida
MA_139442g0010 No alias aldehyde-generating component CER3 of CER1-CER3... 0.04 Archaeplastida
MA_19405g0010 No alias no description available(sp|q69pa8|glo11_orysj : 169.0) 0.07 Archaeplastida
MA_200120g0020 No alias no description available(sp|a2xay1|glo16_orysi : 122.0) 0.02 Archaeplastida
MA_20375g0010 No alias no description available(sp|q69pa8|glo11_orysj : 148.0) 0.02 Archaeplastida
MA_259293g0010 No alias no description available(sp|b8afi3|glo14_orysi : 180.0) 0.08 Archaeplastida
MA_39280g0020 No alias Protein CER1-like 2 OS=Arabidopsis thaliana... 0.09 Archaeplastida
MA_63024g0010 No alias Protein ECERIFERUM 3 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_781241g0010 No alias no description available(sp|q67wq7|glo13_orysj : 120.0) 0.1 Archaeplastida
MA_86136g0010 No alias No annotation 0.02 Archaeplastida
MA_9017265g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g14030.1 No alias aldehyde-generating component CER3 of CER1-CER3... 0.05 Archaeplastida
Pp3c18_18020V3.1 No alias Fatty acid hydroxylase superfamily 0.05 Archaeplastida
Pp3c7_5340V3.1 No alias Fatty acid hydroxylase superfamily 0.04 Archaeplastida
Smo137211 No alias Protein ECERIFERUM 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo230422 No alias Cell wall.cutin and suberin.cuticular lipid... 0.04 Archaeplastida
Smo437448 No alias Cell wall.cutin and suberin.cuticular lipid... 0.07 Archaeplastida
Smo99824 No alias Protein ECERIFERUM 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc01g088400.4.1 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.04 Archaeplastida
Zm00001e012705_P002 No alias aldehyde decarbonylase component CER1 of CER1-CER3... 0.04 Archaeplastida
Zm00001e013813_P001 No alias aldehyde-generating component CER3 of CER1-CER3... 0.06 Archaeplastida
Zm00001e034209_P002 No alias aldehyde-generating component CER3 of CER1-CER3... 0.15 Archaeplastida
Zm00001e037664_P003 No alias aldehyde-generating component CER3 of CER1-CER3... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!