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  4. Sequence
  5. Solyc07g019530.3.1

Solyc07g019530.3.1


Description : no hits & (original description: none)


Gene families : OG0003557 (Archaeplastida) Phylogenetic Tree(s): OG0003557_tree ,
OG_05_0004227 (LandPlants) Phylogenetic Tree(s): OG_05_0004227_tree ,
OG_06_0006992 (SeedPlants) Phylogenetic Tree(s): OG_06_0006992_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g019530.3.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00224250 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
GSVIVT01029211001 No alias No description available 0.03 Archaeplastida
Mp2g10830.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c12_10100V3.1 No alias Afadin/alpha-actinin-binding protein 0.04 Archaeplastida
Pp3c26_7180V3.1 No alias Afadin/alpha-actinin-binding protein 0.07 Archaeplastida
Pp3c5_23860V3.1 No alias Afadin/alpha-actinin-binding protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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  • Type GO Term Name Evidence Source
    CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
    MF GO:0000166 nucleotide binding IEP Neighborhood
    CC GO:0000775 chromosome, centromeric region IEP Neighborhood
    BP GO:0001510 RNA methylation IEP Neighborhood
    MF GO:0003674 molecular_function IEP Neighborhood
    MF GO:0003676 nucleic acid binding IEP Neighborhood
    MF GO:0003682 chromatin binding IEP Neighborhood
    MF GO:0003689 DNA clamp loader activity IEP Neighborhood
    MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
    MF GO:0003774 motor activity IEP Neighborhood
    MF GO:0003777 microtubule motor activity IEP Neighborhood
    MF GO:0003824 catalytic activity IEP Neighborhood
    MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
    MF GO:0003924 GTPase activity IEP Neighborhood
    MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
    MF GO:0005488 binding IEP Neighborhood
    MF GO:0005515 protein binding IEP Neighborhood
    MF GO:0005524 ATP binding IEP Neighborhood
    CC GO:0005575 cellular_component IEP Neighborhood
    CC GO:0005634 nucleus IEP Neighborhood
    CC GO:0005663 DNA replication factor C complex IEP Neighborhood
    CC GO:0005667 transcription factor complex IEP Neighborhood
    BP GO:0006259 DNA metabolic process IEP Neighborhood
    BP GO:0006260 DNA replication IEP Neighborhood
    BP GO:0006265 DNA topological change IEP Neighborhood
    BP GO:0006325 chromatin organization IEP Neighborhood
    BP GO:0006338 chromatin remodeling IEP Neighborhood
    BP GO:0006479 protein methylation IEP Neighborhood
    BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
    BP GO:0007017 microtubule-based process IEP Neighborhood
    BP GO:0007018 microtubule-based movement IEP Neighborhood
    BP GO:0007059 chromosome segregation IEP Neighborhood
    MF GO:0008017 microtubule binding IEP Neighborhood
    MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
    MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
    MF GO:0008144 drug binding IEP Neighborhood
    MF GO:0008170 N-methyltransferase activity IEP Neighborhood
    BP GO:0008213 protein alkylation IEP Neighborhood
    MF GO:0008276 protein methyltransferase activity IEP Neighborhood
    CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
    BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Neighborhood
    MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
    BP GO:0009987 cellular process IEP Neighborhood
    MF GO:0015631 tubulin binding IEP Neighborhood
    BP GO:0016043 cellular component organization IEP Neighborhood
    MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
    MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
    MF GO:0016462 pyrophosphatase activity IEP Neighborhood
    BP GO:0016556 mRNA modification IEP Neighborhood
    BP GO:0016571 histone methylation IEP Neighborhood
    MF GO:0016787 hydrolase activity IEP Neighborhood
    MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
    MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
    MF GO:0016853 isomerase activity IEP Neighborhood
    MF GO:0017076 purine nucleotide binding IEP Neighborhood
    MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
    BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
    MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
    BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
    BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
    MF GO:0019208 phosphatase regulator activity IEP Neighborhood
    MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
    BP GO:0022402 cell cycle process IEP Neighborhood
    MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
    CC GO:0031262 Ndc80 complex IEP Neighborhood
    MF GO:0031491 nucleosome binding IEP Neighborhood
    BP GO:0032259 methylation IEP Neighborhood
    MF GO:0032553 ribonucleotide binding IEP Neighborhood
    MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
    MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
    CC GO:0032991 protein-containing complex IEP Neighborhood
    MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
    BP GO:0034968 histone lysine methylation IEP Neighborhood
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
    MF GO:0036094 small molecule binding IEP Neighborhood
    MF GO:0042054 histone methyltransferase activity IEP Neighborhood
    MF GO:0043015 gamma-tubulin binding IEP Neighborhood
    BP GO:0043044 ATP-dependent chromatin remodeling IEP Neighborhood
    MF GO:0043167 ion binding IEP Neighborhood
    MF GO:0043168 anion binding IEP Neighborhood
    CC GO:0043226 organelle IEP Neighborhood
    CC GO:0043227 membrane-bounded organelle IEP Neighborhood
    CC GO:0043229 intracellular organelle IEP Neighborhood
    CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
    BP GO:0043414 macromolecule methylation IEP Neighborhood
    CC GO:0044422 organelle part IEP Neighborhood
    CC GO:0044424 intracellular part IEP Neighborhood
    CC GO:0044427 chromosomal part IEP Neighborhood
    CC GO:0044446 intracellular organelle part IEP Neighborhood
    CC GO:0044464 cell part IEP Neighborhood
    MF GO:0044877 protein-containing complex binding IEP Neighborhood
    BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
    BP GO:0051276 chromosome organization IEP Neighborhood
    BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Neighborhood
    BP GO:0071103 DNA conformation change IEP Neighborhood
    BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
    BP GO:0080009 mRNA methylation IEP Neighborhood
    MF GO:0097159 organic cyclic compound binding IEP Neighborhood
    MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
    CC GO:0098687 chromosomal region IEP Neighborhood
    BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
    MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
    MF GO:1901363 heterocyclic compound binding IEP Neighborhood
    BP GO:1903046 meiotic cell cycle process IEP Neighborhood
    BP GO:1903047 mitotic cell cycle process IEP Neighborhood
    CC GO:1903293 phosphatase complex IEP Neighborhood
    InterPro domains Description Start Stop
    IPR021622 Afadin/alpha-actinin-bd 34 181
    No external refs found!