Solyc07g043360.1.1

Description : component RPL27 of LSU proteome component

Gene families : OG0002403 (Archaeplastida) Phylogenetic Tree(s): OG0002403_tree ,
OG_05_0002938 (LandPlants) Phylogenetic Tree(s): OG_05_0002938_tree ,
OG_06_0003422 (SeedPlants) Phylogenetic Tree(s): OG_06_0003422_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g043360.1.1
Cluster	HCCA: Cluster_222

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00176990	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.09	Archaeplastida
AMTR_s00045p00086530	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	Archaeplastida
AT3G22230	No alias	Ribosomal L27e protein family	0.11	Archaeplastida
AT4G15000	No alias	Ribosomal L27e protein family	0.11	Archaeplastida
Cpa\|evm.model.tig00021275.23	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.1	Archaeplastida
Cre17.g701650	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.11	Archaeplastida
GSVIVT01012080001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	Archaeplastida
Gb_34700	No alias	component RPL27 of LSU proteome component	0.02	Archaeplastida
Gb_36674	No alias	component RPL27 of LSU proteome component	0.08	Archaeplastida
LOC_Os02g18380.1	No alias	component RPL27 of LSU proteome component	0.04	Archaeplastida
LOC_Os10g41470.1	No alias	component RPL27 of LSU proteome component	0.04	Archaeplastida
MA_3390g0010	No alias	component RPL27 of LSU proteome component	0.1	Archaeplastida
Mp4g23910.1	No alias	component RPL27 of LSU proteome component	0.13	Archaeplastida
Pp3c15_4610V3.1	No alias	Ribosomal L27e protein family	0.09	Archaeplastida
Pp3c24_20290V3.1	No alias	Ribosomal L27e protein family	0.09	Archaeplastida
Pp3c8_24410V3.1	No alias	Ribosomal L27e protein family	0.1	Archaeplastida
Smo166700	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001141	Ribosomal_L27e	52	135

External Links

No external refs found!

Solyc07g043360.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation