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  5. Solyc07g053700.4.1

Solyc07g053700.4.1


Description : Reticulon-like protein B17 OS=Arabidopsis thaliana (sp|q6dr04|rtnlq_arath : 262.0)


Gene families : OG0003270 (Archaeplastida) Phylogenetic Tree(s): OG0003270_tree ,
OG_05_0002482 (LandPlants) Phylogenetic Tree(s): OG_05_0002482_tree ,
OG_06_0002417 (SeedPlants) Phylogenetic Tree(s): OG_06_0002417_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g053700.4.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00213680 evm_27.TU.AmTr_v1... Reticulon-like protein B18 OS=Arabidopsis thaliana 0.11 Archaeplastida
AMTR_s00065p00202980 evm_27.TU.AmTr_v1... Reticulon-like protein B21 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT2G20590 No alias Reticulon family protein 0.1 Archaeplastida
AT4G28430 No alias Reticulon family protein 0.12 Archaeplastida
GSVIVT01020595001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana 0.21 Archaeplastida
Gb_25024 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.09 Archaeplastida
MA_22853g0010 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp1g14200.1 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c12_15930V3.1 No alias Reticulon family protein 0.04 Archaeplastida
Zm00001e024730_P001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 178 332
No external refs found!