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Description : Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica (sp|c7au21|d27_orysj : 144.0)
Gene families : OG0001228 (Archaeplastida) Phylogenetic Tree(s): OG0001228_tree ,
OG_05_0002282 (LandPlants) Phylogenetic Tree(s): OG_05_0002282_tree ,
OG_06_0003035 (SeedPlants) Phylogenetic Tree(s): OG_06_0003035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc08g008630.4.1 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00018p00255680 | evm_27.TU.AmTr_v1... | Beta-carotene isomerase D27, chloroplastic... | 0.08 | Archaeplastida | |
| AMTR_s00264p00017830 | evm_27.TU.AmTr_v1... | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.02 | Archaeplastida | |
| AT1G64680 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.12 | Archaeplastida | |
| AT4G01995 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.05 | Archaeplastida | |
| GSVIVT01019663001 | No alias | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.07 | Archaeplastida | |
| GSVIVT01028138001 | No alias | Beta-carotene isomerase D27, chloroplastic... | 0.09 | Archaeplastida | |
| LOC_Os08g02210.2 | No alias | Beta-carotene isomerase D27, chloroplastic... | 0.1 | Archaeplastida | |
| MA_167711g0010 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| MA_18999g0010 | No alias | no hits & (original description: none) | 0.09 | Archaeplastida | |
| Mp6g01750.1 | No alias | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.04 | Archaeplastida | |
| Pp3c26_11090V3.1 | No alias | No annotation | 0.05 | Archaeplastida | |
| Smo99098 | No alias | Beta-carotene isomerase D27, chloroplastic... | 0.05 | Archaeplastida | |
| Zm00001e029191_P001 | No alias | Beta-carotene isomerase D27, chloroplastic... | 0.05 | Archaeplastida | |
| Zm00001e040329_P004 | No alias | Beta-carotene isomerase D27, chloroplastic... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
| CC | GO:0009521 | photosystem | IEP | Neighborhood |
| CC | GO:0009522 | photosystem I | IEP | Neighborhood |
| CC | GO:0009523 | photosystem II | IEP | Neighborhood |
| CC | GO:0009538 | photosystem I reaction center | IEP | Neighborhood |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
| BP | GO:0015979 | photosynthesis | IEP | Neighborhood |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | Neighborhood |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Neighborhood |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Neighborhood |
| MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
| MF | GO:0019829 | cation-transporting ATPase activity | IEP | Neighborhood |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Neighborhood |
| MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0032977 | membrane insertase activity | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| CC | GO:0034357 | photosynthetic membrane | IEP | Neighborhood |
| MF | GO:0042625 | ATPase coupled ion transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:0042651 | thylakoid membrane | IEP | Neighborhood |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Neighborhood |
| BP | GO:0046164 | alcohol catabolic process | IEP | Neighborhood |
| BP | GO:0046174 | polyol catabolic process | IEP | Neighborhood |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | Neighborhood |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | Neighborhood |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | Neighborhood |
| MF | GO:0071949 | FAD binding | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025114 | DUF4033 | 157 | 239 |
| No external refs found! |