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Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.77
No description available
Gene families : OG0002375 (Archaeplastida) Phylogenetic Tree(s): OG0002375_tree ,
OG_05_0005839 (LandPlants) Phylogenetic Tree(s): OG_05_0005839_tree ,
OG_06_0007554 (SeedPlants) Phylogenetic Tree(s): OG_06_0007554_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00029p00083380 | |
| Cluster | HCCA: Cluster_147 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G23110 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.2 | Archaeplastida | |
| Cpa|evm.model.tig00000615.2 | No alias | No description available | 0.03 | Archaeplastida | |
| Cre01.g044850 | No alias | No description available | 0.02 | Archaeplastida | |
| GSVIVT01012044001 | No alias | No description available | 0.12 | Archaeplastida | |
| Gb_03746 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Gb_03748 | No alias | no hits & (original description: none) | 0.1 | Archaeplastida | |
| MA_10436421g0010 | No alias | no hits & (original description: none) | 0.14 | Archaeplastida | |
| MA_29192g0010 | No alias | no hits & (original description: none) | 0.1 | Archaeplastida | |
| Mp5g01480.1 | No alias | no hits & (original description: none) | 0.08 | Archaeplastida | |
| Pp3c9_15860V3.1 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.03 | Archaeplastida | |
| Smo152901 | No alias | No description available | 0.02 | Archaeplastida | |
| Solyc02g014180.2.1 | No alias | no hits & (original description: none) | 0.13 | Archaeplastida | |
| Solyc02g014190.4.1 | No alias | no hits & (original description: none) | 0.17 | Archaeplastida | |
| Zm00001e006551_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| CC | GO:0000922 | spindle pole | IEP | Neighborhood |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
| CC | GO:0005815 | microtubule organizing center | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0009966 | regulation of signal transduction | IEP | Neighborhood |
| BP | GO:0010646 | regulation of cell communication | IEP | Neighborhood |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Neighborhood |
| CC | GO:0016592 | mediator complex | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
| BP | GO:0023051 | regulation of signaling | IEP | Neighborhood |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Neighborhood |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Neighborhood |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
| MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Neighborhood |
| BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |