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  4. Sequence
  5. Solyc08g065740.3.1

Solyc08g065740.3.1


Description : no hits & (original description: none)


Gene families : OG0001206 (Archaeplastida) Phylogenetic Tree(s): OG0001206_tree ,
OG_05_0012492 (LandPlants) Phylogenetic Tree(s): OG_05_0012492_tree ,
OG_06_0012568 (SeedPlants) Phylogenetic Tree(s): OG_06_0012568_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g065740.3.1
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230380 evm_27.TU.AmTr_v1... Multi-process regulation.programmed cell death.VPE... 0.02 Archaeplastida
AT2G25940 ALPHA-VPE, ALPHAVPE alpha-vacuolar processing enzyme 0.06 Archaeplastida
GSVIVT01006037001 No alias Multi-process regulation.programmed cell death.VPE... 0.04 Archaeplastida
GSVIVT01029564001 No alias Multi-process regulation.programmed cell death.VPE... 0.03 Archaeplastida
LOC_Os05g51570.1 No alias asparaginyl endopeptidase (Legumain). VPE programmed... 0.02 Archaeplastida
MA_157438g0010 No alias asparaginyl endopeptidase (Legumain). VPE programmed... 0.02 Archaeplastida
MA_86205g0010 No alias asparaginyl endopeptidase (Legumain). VPE programmed... 0.03 Archaeplastida
Pp3c20_10970V3.1 No alias beta vacuolar processing enzyme 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!